![]() ![]() To facilitate such online accessible sequence assembly and analysis, we created Yet Another Quick Assembly, Analysis and Trimming Tool web server for the automated assembly of multiple. Through web servers with expanded automation and functionalities, even smartphones/phablets can be used to perform complex analysis previously limited to desktops, especially if they can upload files from cloud storage. With increased data output worldwide, there is also a need for automated quality checks and trimming prior to large assemblies, along with automated detection of mutations. American Phytopathological Society, St.Even with the ubiquity of Sanger sequencing, automated assembly software are predominantly stand-alone software packages for desktop/laptop use with very few online equivalents, thus geospatially constraining sequence analysis and assembly. White DG (1999) Compendium of Corn Diseases, 3rd edn. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Tamura K, Nei M (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Commonwealth Mycological Institute, Kew, Surrey, UK Sutton BC, Waterson JM (1966) Descriptions of pathogenic fungi and bacteria. Sutton BC (1980) The Coelomycetes, Fungi Imperfecti with acervuli, pycnidia and stromata. Journal of agricultural and food chemistry 59(16): 9039–9044. Snyman LD, Kellerman TS, Vleggaar R, Flett BC, Basson KM, Schultz RA (2011) Diplonine, a neurotoxin isolated from cultures of the fungus Stenocarpella maydis (Berk.) Sacc. mx:8080/agricola_siap_gobmx/ResumenProducto.do SIAP (2020) Servicio de Información Agroalimentaria y Pesquera. Olatinwo R, Cardwell K, Menkir A, Deadman M, Julian A (1999) Inheritance of resistance to Stenocarpella macrospora (Earle) ear rot of maize in the mid-altitude zone of Nigeria. ![]() McGuire Jr JU, Crandall BS (1967) Survey of insect pests and plant diseases of selected food crops of Mexico, Central America and Panama. Latterell FM, Rossi AE (1983) Stenocarpella macrospora (= Diplodia macrospora) and S. Kumar S, Stecher G, Tamura K (2016) MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Kirby KS (1965) Isolation and characterization of ribosomal ribonucleic acid. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Griekspoor A, Groothuis T (1994) 4Peaks by. ![]() įlett BC, Mclaren NW (1994) Optimum disease potential for evaluating resistance to Stenocarpella maydis ear rot in corn hybrids. Ĭrous PW, Slippers B, Wingfield MJ, Rheeder J, Marasas WFO, Philips AJL, Alves A, Burgess T, Barber P, Groenewald JZ (2006) Phylogenetic lineages in the Botryosphaeriaceae. Fitofilo 71:1–169īennetzen JL, Hake S (2009) Handbook of maize: Genetics and genomics. Alvarez MG (1976) Primer catalogo de enfermedades de plantas mexicanas. ![]()
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